Table. 1.

Results of the custom nested BLAST using partial MCP DNA sequences (506 bp) of the three ranavirus types (Type A, B, and C) from Pelophylax nigromaculatus and Lithobates catesbeianus in this study

Sequence (accession number) Host species Country Identical sites (%)
Type A Type B Type C
Type A (OP009373-009376) Pelophylax nigromaculatus, Lithobates catesbeianus Korea 99.4 99.6
Type B (OP009377) Pelophylax nigromaculatus Korea 99.4 99.8
Type C (OP009378) Lithobates catesbeianus Korea 99.6 99.8
Rana catesbeiana virus (AB474588) Rana catesbeiana Japan 99.6 99.8 100.0
KRV-1 (HM133594) Pelophylax chosenicus Korea 99.6 99.8 100.0
Rana grylio iridovirus (JQ654586) Rana grylio China 99.6 99.8 100.0
Rana catesbeiana virus (KC756964) Rana catesbeiana Taiwan 99.4 99.6 99.8
Soft shelled turtle iridovirus (DQ335253) Trionyx sinensis China 99.4 99.6 99.8
Rana grylio iridovirus (KY264204) Rana huanrenensis Korea 99.4 99.6 99.8
Frog virus 3 (MH332773) Lithobates sp. Canada 99.4 100.0 99.8
Frog virus 3 (KF646249) Scaphirhynchus albus USA 99.4 100.0 99.8
Frog virus 3 (MF360246) Oophaga pumilio Netherlands 99.4 100.0 99.8
Frog virus 3 (MF411070) Rana temporaria UK 99.4 100.0 99.8
Lacerta monticola ranavirus (KM516719) Lacerta monticola Portugal 99.4 100.0 99.8
Rana grylio iridovirus (KY264205) Rana dybowskii
Rana huanrenensis
Korea 99.2 99.4 99.6
Frog virus 3 (DQ897669) Rana catesbeiana Brazil 99.0 99.6 99.4
Bohle iridovirus (FJ358613) Limnodynastes ornatus Australia 99.0 99.2 99.4
Zoo ranavirus (KF699143) Anaxyrus boreas boreas USA 98.8 99.0 99.2
German gecko ranavirus (KP266742) Uroplatus fimbriatus Germany 98.8 99.0 99.2
Common midwife toad virus (JQ231222) Alytes obstetricians Spain 98.6 98.8 99.0
Common midwife toad virus (MF125269) Pelophylax esculentus Netherlands 98.4 98.6 98.8
Tiger frog virus (MT512504) Hoplobatrachus tigerinus Thailand 98.4 98.6 98.8
Tortoise ranavirus (KM516713) Testudo hermanni Germany 98.2 98.4 98.6
Pike perch iridovirus (FJ358610) Stizostedion lucioperca Finland 98.2 98.4 98.6
Blood python ranavirus (KM516715) Python brongersmai Germany 98.0 98.2 98.4

BLAST: Basic Local Alignment Search Tool; MCP: major capsid protein.

Reference ranavirus sequences were downloaded from GenBank.

J Ecol Environ 2022;46:- https://doi.org/10.5141/jee.22.051
© J Ecol Environ